PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr3g101780.2
Common NameMTR_3g101780
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 432aa    MW: 47142 Da    PI: 9.8401
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr3g101780.2genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.34.6e-15353404556
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                      +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+ ee+ ++ 
  Medtr3g101780.2 353 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQEEIMELQ 404
                      69****************************************9999988765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF819951.36E-5198263No hitNo description
SMARTSM003385.7E-14349414IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.519351402IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-10353402No hitNo description
CDDcd147073.21E-28353407No hitNo description
PfamPF001703.9E-13353405IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-14353403No hitNo description
PROSITE patternPS000360356371IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MNFKGFGNDP GASGNGGGRI AAGNFPLTRQ PSVYSLTVDE FMNSMGGSGK DFGSMNMDEL  60
LKNIWSAEEV QTMGGEEAIS NHLQRQGSLT LPRTLSQKTV DEVWKDISKD YGGPNLAAPM  120
TQRQPTLGEM TLEEFLVRAG VVREDAKPND GVFLDLGNVG NNGNLGLAFQ AQQMNKVAGF  180
MGNGNRINGN DDPLVGLQSP TNLPLNVNGI RSTNQQQQMQ NSQSQAQQQH QNQQLQQLQQ  240
QQQQQQIFPK QPGLNYATQM PLSNNQGMRG GIVGLSPDHG MNGNLVQGGG IGMVGLAPGA  300
VQIGAVSPAN QISSDKMGKS NGDTSSVSPV PYVFNGGMRG RKGNGAVEKV IERRQRRMIK  360
NRESAARSRA RKQAYTMELE AEVAKLKEEN EELQKKQEEI MELQKNQVKE MMNLQREVKR  420
KCLRRTQTGP W*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}.
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr3g101780.2
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCU0120430.0CU012043.5 M.truncatula DNA sequence from clone MTH2-63O12 on chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003603049.10.0bZIP transcription factor 46
RefseqXP_024635171.10.0bZIP transcription factor 46
RefseqXP_024635172.10.0bZIP transcription factor 46
SwissprotQ9M7Q41e-123AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLG7J6E30.0G7J6E3_MEDTR; ABA response element-binding factor
STRINGAES733000.0(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.11e-104abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]
  2. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  3. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]