PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr3g103360.1
Common NameMTR_3g103360
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 142aa    MW: 15926.1 Da    PI: 7.6764
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr3g103360.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.7e-1056100549
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                      ++ rr+q+NRe+A+rsR +Kk+ +e  +++   L  eN++Lk++l
  Medtr3g103360.1  56 RKLRRMQSNRESAQRSRYKKKKHLETVANRLNGLRIENQELKNQL 100
                      6789*************************************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-1052116IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.89854101IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.0E-954101No hitNo description
SuperFamilySSF579591.25E-1056110No hitNo description
PfamPF001706.6E-856100IPR004827Basic-leucine zipper domain
CDDcd147026.05E-1357107No hitNo description
PROSITE patternPS0003605974IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MLFQTEEAVQ LPVLETMLSE SEIQYLLSLI NQSEDPASPS SGSIGSNRAD YSVKERKLRR  60
MQSNRESAQR SRYKKKKHLE TVANRLNGLR IENQELKNQL AFTMHHHLLL SLENDQLLSE  120
SVALLATLSN LCAILSNSIS S*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr3g103360.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013461806.16e-97basic leucine zipper 4
TrEMBLA0A072V2G31e-95A0A072V2G3_MEDTR; BZIP transcription factor
STRINGGLYMA06G05111.13e-57(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF59963052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49760.13e-21basic leucine-zipper 5
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]