PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr3g465350.1
Common NameMTR_3g465350
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 220aa    MW: 25371.4 Da    PI: 6.3122
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr3g465350.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_119.81.8e-06691111658
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  16 AArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                      +A rsR++  ++   L +kvk +ea+ ++L++++e+ +++  +
  Medtr3g465350.1  69 SAHRSRRKEDQYFTYLSKKVKDIEAQVTDLRSQVESKQNQKHS 111
                      8********************************9987776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.3E-569112No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MGDIEGNYNH VPFQTKPPLC PPTSGSVWGA TFNHSAANLR ANLGLNSDQN MNPKRIRRSY  60
IDTFTQDYSA HRSRRKEDQY FTYLSKKVKD IEAQVTDLRS QVESKQNQKH SLMLERERLM  120
DQVAIHHKKA LHKDAESEEL KIQVKKLREL YVNQKAEELA QLINGNYTNV QPMSNEQGPL  180
QSQMWTPAVS DEHETEPSSM ELWVMELMDQ NPNIDDLFL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr3g465350.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1576475e-47AC157647.42 Medicago truncatula clone mth2-66k5, complete sequence.
GenBankCU4683015e-47CU468301.11 M.truncatula DNA sequence from clone MTH2-53K24 on chromosome 3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A072UY951e-164A0A072UY95_MEDTR; Uncharacterized protein
STRINGAES700891e-119(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1815634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-09bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]