PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr4g033680.1
Common NameMTR_4g033680
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 222aa    MW: 25627.4 Da    PI: 8.2186
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr4g033680.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.41.1e-06701042660
                      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  26 aeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                      +++++Le++v eL +e ++L+ e+e+l ++v++l+
  Medtr4g033680.1  70 QKMDQLEQEVHELREEKTTLRAEVEKLPNLVSSLT 104
                      89******************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.9E-568103No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MDQLEQEVHE LREDKTTLRA EVEKLPNLVS SLTVTQYQPL CMQQPRQQAP RQFILQNQVR  60
KASHLHMQTQ KMDQLEQEVH ELREEKTTLR AEVEKLPNLV SSLTVTQYQP LCMQQPRQQA  120
PRQFILQNQV QKASQFDLIP MKYAELLPTL LKKNLVQTRA PPRVPNKLAE VQKLIEDNTM  180
SFEDPDPNVV LKQPQQQYPA YHPVAVVKPV ANAVQNPGYQ P*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr4g033680.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1448051e-174AC144805.9 Medicago truncatula clone mth2-72a11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024635695.15e-50alpha/beta-gliadin-like
TrEMBLG7JPA71e-155G7JPA7_MEDTR; Uncharacterized protein
STRINGAES877511e-156(Medicago truncatula)
STRINGAES877721e-156(Medicago truncatula)
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]