PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr4g072090.1
Common NameMTR_4g072090
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 507aa    MW: 55885.8 Da    PI: 7.0665
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr4g072090.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.42.1e-10362419562
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                      kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l+++
  Medtr4g072090.1 362 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 419
                      9********************************************9998877666666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.1E-18358422IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.749360423IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.0E-9362419No hitNo description
PfamPF001704.9E-9362416IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-11362413No hitNo description
CDDcd147036.40E-25363412No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    Send to blast
MEDTEAASSF KMNNHMEQLT IPQFNASSQS QMRTVTRNHH HNQRGGGIPP SHPHQIPPIS  60
PYSHMNNQIP VSRPQMPSHS TSPTPSHTRS LSQPSFFSLD SLPPLSPCTF RESSSTSDHA  120
DVSMEDRDVT SHSPLPPFAA RNPSLPPRKS HRRSNSDIPF GFSTVLQSSP PLIPLRGREG  180
VKPNSSVVKR ETNWEHGNVE EKKSLSPEGE VVDDLFSAYM NLDNIDAIND DKNAATDDSR  240
ASGTKTNGGD SSDNEAESSV NESGDSMQRR EGNKRSAGGD IAPTTRHYRS VSMDSFIGKL  300
NFNDESLKMP PSPGGLMSPG NSGDGNNAAF SLEFGNGEFS GPELKKIMAN EKLAEIAMAD  360
PKRAKRILAN RQSAARSKER KMRYISELEH KVQTLQTEAT TLSAQLTLLQ RDSVGLTNQN  420
SELKFRLQSM EQQAKLRDAL NEALTAEVQR LKIVTAELNG ESLPSNCMIP QHSVNPMMFQ  480
QQHQHQQHQQ QQQQNGNANS KNELKQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.20230.0root| stem
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr4g072090.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1482930.0AC148293.6 Medicago truncatula clone mth2-16c13, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003607083.10.0probable transcription factor PosF21
TrEMBLG7JJX70.0G7JJX7_MEDTR; BZIP transcription factor
STRINGAES892800.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.37e-99bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]