PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g015990.1
Common NameMTR_7g015990
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 192aa    MW: 21649.2 Da    PI: 9.8578
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g015990.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.61.3e-13121175556
                      CHHHCHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKka...eieeLeekvkeLeaeNkaLkkeleelkkev 56 
                      +r +r++kNRe+A rsR+RK++   ++ eLe+ v+ Le+eN +L+ + +e kk++
  Medtr7g015990.1 121 RRNKRMIKNRESAARSRARKQEmiaYTIELEQQVQLLEEENARLRRQQQESKKLM 175
                      699******************7333667*********************999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-10117180IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.1E-13117173No hitNo description
CDDcd147071.58E-21121173No hitNo description
SuperFamilySSF579598.13E-10121181No hitNo description
PfamPF001701.3E-11121176IPR004827Basic-leucine zipper domain
PROSITE patternPS000360124139IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MEVNLSSLNH ENTRPVMMST RNSTFGGVPK SIDYSSNNSS SFIASYQNNN NASFFCPTST  60
TTLPLLQQQQ QQQQQNIAAP RVSASVNPSP YDQSVGVAAS NSFTCFGKKF GEEPDISPGE  120
RRNKRMIKNR ESAARSRARK QEMIAYTIEL EQQVQLLEEE NARLRRQQQE SKKLMYFLIK  180
YITFSQVANF A*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g015990.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1235711e-65AC123571.8 Medicago truncatula clone mth1-14n3, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024640475.12e-50protein FD
TrEMBLA0A072TWD01e-137A0A072TWD0_MEDTR; Basic leucine zipper transcription factor
STRINGAES951901e-63(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37553252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.22e-16basic region/leucine zipper motif 27
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]