PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g088890.1
Common NameMTR_7g088890, MtrDRAFT_AC183371g2v1
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 766aa    MW: 83867.6 Da    PI: 5.498
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g088890.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.18.9e-14259320263
                      XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      ++ kr  r+++NRe+A+ sRqRKk ++eeLeekv ++ +  ++L +++     e a+l++++
  Medtr7g088890.1 259 EDEKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSSKITYVMAENATLRQQL 320
                      6789************************************************9999999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.6E-17258322IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.53260320IPR004827Basic-leucine zipper domain
PfamPF001704.9E-12261320IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-17262321No hitNo description
SuperFamilySSF579595.13E-12262320No hitNo description
CDDcd147041.08E-20263314No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042538Biological Processhyperosmotic salinity response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005783Cellular Componentendoplasmic reticulum
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 766 aa     Download sequence    Send to blast
MADSILTFQP PPEQPPEQPP SSDLDFNDYG GEFNNTALPS FDSFFNDSDP DLDFLGDFEI  60
TFDDLDNLPI PSETDDYLFH DACNADGVPI SHVIDNSPES GASVVSGDQS PGVSRFLNLD  120
SVADDDEKEN SADVKVLSFS LPETENENTE NSYREREESS NGPASSQGSG NGGSGVYEAM  180
NSPERDVSSF HENENVKEDV KLEGSVVKGC DLKRKKENSH ESAENRTSKC SRRSLSMERT  240
EQQQFQQQAQ SGFDGIEDED EKRKARLMRN RESAQLSRQR KKHYVEELEE KVRSMHSTIT  300
DLSSKITYVM AENATLRQQL SGGVMCPPPP PGAAMYPPHP GMAPMPYAWM PCAPYVVKPQ  360
GSQVPLVPIP RLKPQPTAAA SKSKKSESKK SEVKTKKVAS ISLLGLFFCI MLFGGLVPLV  420
DFKFGGLVDN VSGRSSYVSD RWFYGHGGGK IWPVNGHMNE SGRNGEAGFP NGRFGISDRN  480
NYERGRKLGE EMNDRKDSSC FGHRDNASEP LLASLYVPRN DKLVKIDGNL IIHSIMASEK  540
AMASQDAQGK KEKSETGLAI RDSALAIPEV GRNRGQHPNV YRVSAEQRRA IGSGSTKTLK  600
DHMKSSATDG KMQQWFREGI AGPMLSSGMC TEVFQFDVSP APGAIVPAAA VANISSENRQ  660
NSTNVNKSRN RRILHTLPDP LPGTRLNITE ERARNLPKDH LPGNKSSMVV SVLVDPKEVG  720
DGDVDGMMAP KSLSRIFVVV LIDSVKYVTY SCGLPRVSPL VTAYV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1658671RQNSTNVNKSRNRR
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.179430.0glandular trichome| leaf| pod| root| stem
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:17662035, ECO:0000269|PubMed:20876872}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g088890.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1833710.0AC183371.2 Medicago truncatula chromosome 7 clone mth2-9g15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003624906.10.0bZIP transcription factor 17
SwissprotO222081e-171BZP17_ARATH; bZIP transcription factor 17
TrEMBLA2Q6G90.0A2Q6G9_MEDTR; BZIP transcription factor
STRINGAES811240.0(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74873448
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40950.11e-142bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]
  2. Zhou SF, et al.
    Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis.
    New Phytol., 2015. 208(1): p. 188-97
    [PMID:25919792]
  3. Sagor GH, et al.
    The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis.
    Front Plant Sci, 2015. 6: p. 687
    [PMID:26442007]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  5. Kim JS,Yamaguchi-Shinozaki K,Shinozaki K
    ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation.
    Plant Physiol., 2018. 176(3): p. 2221-2230
    [PMID:29367234]
  6. Cifuentes-Esquivel N, et al.
    bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress.
    J. Cell. Biochem., 2018. 119(8): p. 6857-6868
    [PMID:29693271]
  7. Guan P, et al.
    SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance.
    Plant Physiol., 2018. 178(3): p. 1390-1405
    [PMID:30287478]