PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g105480.1
Common NameMTR_7g105480
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family G2-like
Protein Properties Length: 97aa    MW: 11127.1 Da    PI: 10.0686
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g105480.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like24.55.9e-0847752553
          G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkY 53
                      +At k+++++m  +gLt++h+  HLQ +
  Medtr7g105480.1 47 ANATLKNLMRVMVTPGLTMYHLNNHLQTF 75
                     589************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.0E-62475IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 97 aa     Download sequence    Send to blast
MAGLPRYTQS FFTGIWFAFV WIIWKARNER IFKDALTHPY ALVEKVANAT LKNLMRVMVT  60
PGLTMYHLNN HLQTFNFVFL LSGSHLHSLC VVNHSC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g105480.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A072U3772e-65A0A072U377_MEDTR; Transmembrane protein, putative
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12730.12e-07G2-like family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]