PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr7g115140.1
Common NameMTR_7g115140
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 209aa    MW: 23217.4 Da    PI: 9.2913
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr7g115140.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.6e-14132187358
                      XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                      + kr +r+ +NRe+A+rsR RK a+  eLe+ v +L +eN++L k  +   +++ +
  Medtr7g115140.1 132 DAKRLKRMLQNRESAKRSRDRKIAKNTELETQVSTLRGENSSLLKHFSDVDQKYNN 187
                      68******************************************998888877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.4E-15130194IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.4E-11131184No hitNo description
PROSITE profilePS5021710.622132186IPR004827Basic-leucine zipper domain
PfamPF001701.7E-12133185IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.09E-10134184No hitNo description
CDDcd147028.93E-15135186No hitNo description
PROSITE patternPS000360137152IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MLCLVVRLVR GCPFTGAGRI ILLSFLVLLV IWFAVVWEIW KERNNRLFNV KDCSVIQGSS  60
GKFQEPEIGP QTSDPYELGL HPTAKECGPA GAPSMPQKPV VTAIRSTTSG SSDEEKADQG  120
EVNMNRDNNP SDAKRLKRML QNRESAKRSR DRKIAKNTEL ETQVSTLRGE NSSLLKHFSD  180
VDQKYNNSAV ENRILNADFE TIKAKVSP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr7g115140.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1468652e-34AC146865.11 Medicago truncatula clone mth2-36m14, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003626454.17e-45light-inducible protein CPRF2
TrEMBLA0A072U4C71e-153A0A072U4C7_MEDTR; BZIP transcription factor
STRINGAES826735e-40(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.31e-24bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]