PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr8g032210.1
Common NameMTR_8g032210
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bHLH
Protein Properties Length: 117aa    MW: 12694.9 Da    PI: 8.5327
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr8g032210.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.99.6e-057396428
                     HHHHHHHHHHHHHHHHHHHHHCTSC CS
              HLH  4 ahnerErrRRdriNsafeeLrellP 28
                     +h+e+Er RR+riN  +++Lr++  
  Medtr8g032210.1 73 NHSEAER-RRARINLHLDTLRSVFV 96
                     7999997.679**********9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MTSPSPSRQS ALNPQEFASD RINDGCFQGV NGSGYGSSSS LVLDREKGEL VEAAVKLERK  60
GVSPGRSIEA LKNHSEAERR RARINLHLDT LRSVFVNQVS DSSSHNSVSS YHHSFH*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mtr.158674e-97root
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr8g032210.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1270181e-162AC127018.28 Medicago truncatula chromosome 8 clone mth2-8a13, complete sequence.
GenBankAC1603331e-162AC160333.11 Medicago truncatula clone mth2-39p2, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013465233.12e-35transcription factor bHLH30
TrEMBLG7LCM82e-78G7LCM8_MEDTR; Uncharacterized protein
STRINGAET020954e-79(Medicago truncatula)
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]