PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr8g075130.1
Common NameMTR_8g075130
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family bZIP
Protein Properties Length: 179aa    MW: 20730.4 Da    PI: 10.6575
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr8g075130.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.11.6e-12106165562
                      CHHHCHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKka...eieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                      +r +r +kNRe+A rsR+RK++   +i eL++kvk+Le+eN +Lk + ++l ++++++k++
  Medtr8g075130.1 106 RRHKRIMKNRESAARSRARKQEiiaYIFELKKKVKSLEEENARLK-RQQHLCDTASNHKQK 165
                      689******************6444899*****************.999999999999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0011102169IPR004827Basic-leucine zipper domain
CDDcd147074.52E-16106155No hitNo description
Gene3DG3DSA:1.20.5.1709.3E-11106160No hitNo description
SuperFamilySSF579598.84E-8106156No hitNo description
PfamPF001703.1E-9106152IPR004827Basic-leucine zipper domain
PROSITE patternPS000360109124IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MSHQPLQEQT PQQQQHHLRP NKPPKNTMED VWKDINLPSL TNHMSNTVSS PSLMTPSSLH  60
STINLNSLPE FHFDPLAHND LQLEQNHHHT TTLSKVEALL SNSIERRHKR IMKNRESAAR  120
SRARKQEIIA YIFELKKKVK SLEEENARLK RQQHLCDTAS NHKQKRKGNL YRTSTAPF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr8g075130.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1365040.0AC136504.23 Medicago truncatula chromosome 8 clone mth2-13m6, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024629057.11e-110protein FD
TrEMBLG7LB631e-127G7LB63_MEDTR; BZIP transcription factor
STRINGAET037361e-126(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1699577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.12e-15bZIP family protein
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]