PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr8g092010.2
Common NameMTR_8g092010
Organism
Medicago truncatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family WRKY
Protein Properties Length: 136aa    MW: 15696.5 Da    PI: 8.441
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr8g092010.2genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.91.3e-10107131125
                      ---SS-EEEEEEE--TT-SS-EEEE CS
             WRKY   1 ldDgynWrKYGqKevkgsefprsYY 25 
                      +dDgy+WrKYG+K+vk+s++ r+ +
  Medtr8g092010.2 107 MDDGYKWRKYGKKSVKNSPNLRAVF 131
                      69******************99866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-1194132IPR003657WRKY domain
SuperFamilySSF1182907.72E-999131IPR003657WRKY domain
PROSITE profilePS5081112.461102135IPR003657WRKY domain
PfamPF031064.6E-7108133IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MDYYFVNPHA TPNFAHSTHM MIPNPSSEFI LSDYLMLDDI CIDHHDQESR SQSTESLEKV  60
TFNDVNQEFN DATSKNNNIK YKNGIKRNKG EAGQKIAFRT RSELEIMDDG YKWRKYGKKS  120
VKNSPNLRAV FQVAR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMedtr8g092010.2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1558981e-129AC155898.15 Medicago truncatula clone mth2-109f1, complete sequence.
GenBankAC1587371e-129AC158737.14 Medicago truncatula clone mth2-154f20, complete sequence.
GenBankAC2024851e-129AC202485.8 Medicago truncatula clone mth2-176b2, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003630118.12e-93probable WRKY transcription factor 51
TrEMBLA0A072TVK67e-98A0A072TVK6_MEDTR; WRKY family transcription factor
STRINGAET045949e-93(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-15WRKY DNA-binding protein 51
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]