PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00320.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family CPP
Protein Properties Length: 134aa    MW: 15052.3 Da    PI: 5.3691
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00320.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR34.63.8e-114680539
               TCR  5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
                      +C+Ck+++Cl   C+Cf+a+k+Cs +C+C++C+N+
  Migut.A00320.1.p 46 ECECKNTQCLDDTCSCFEARKYCSTKCTCQECRNN 80
                      7*********************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011147.7E-54283IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163414.30343133IPR005172CRC domain
PfamPF036381.2E-84680IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    Send to blast
MEEIEGSRKQ AGVPEMIRNL SDALFAVAEE EDLLNRPDAV FLEDGECECK NTQCLDDTCS  60
CFEARKYCST KCTCQECRNN IVPKSERKRE SQVIINEAPS ASVPPKRKKK RILCCRCFTT  120
DCSSIMCSCF KCN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
186108RKRESQVIINEAPSASVPPKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00320.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012855781.11e-89PREDICTED: protein tesmin/TSO1-like CXC 7
STRINGMigut.A00320.1.p8e-91(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22760.11e-06Tesmin/TSO1-like CXC domain-containing protein