PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A00671.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 297aa    MW: 33514.2 Da    PI: 6.422
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A00671.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.17.4e-28127187259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                       +Dg+nWrKYGqK++ g ++prsYYrCt++   +C+++k+v+rs++dp+++ei+Y+g H ++
  Migut.A00671.1.p 127 EDGHNWRKYGQKDILGHKYPRSYYRCTYRtarNCWATKQVQRSDKDPTLFEIVYKGVHACN 187
                       7**************************99999**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.806.8E-26123187IPR003657WRKY domain
SuperFamilySSF1182904.32E-24125188IPR003657WRKY domain
SMARTSM007742.1E-35126188IPR003657WRKY domain
PfamPF031062.5E-25127186IPR003657WRKY domain
PROSITE profilePS5081120.897127189IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MDSALPWDYK MLIEELTQGM ENATQLRLRL CATSPSKDHD FLVQTILSTF EKALLALRWR  60
ESIGQPQVGP PTPTAPDSSS VSVDTSPKSE DTKRNFGDNK SKKRKLQPTW TEKVRVDYEN  120
GLDGPKEDGH NWRKYGQKDI LGHKYPRSYY RCTYRTARNC WATKQVQRSD KDPTLFEIVY  180
KGVHACNASH CHHQTEQKNN PTLSEFKANL RVETEDLGGI EEVAAAPHFS FPSAFYDNDL  240
GEYEYSPLFY SPATSASNYF SSHASTTNSP IGGTEFSIVP QDLDQNFPFS SLGFFV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-151281841874Disease resistance protein RRS1
5w3x_D2e-151281841874Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A00671.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854266.10.0PREDICTED: probable WRKY transcription factor 53 isoform X2
TrEMBLA0A022QA180.0A0A022QA18_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.A00671.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18432467
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23810.12e-44WRKY family protein