PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.A01003.1.p

Common Name

MIMGU_mgv1a018128mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

GeBP

Protein Properties

Length: 249aa MW: 28216.5 Da PI: 6.2435

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.A01003.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	66.2	7.2e-21	24	114	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 +f +++ eeDei +L Gl + + +g+ +++++ ++f+k+ + ++s++ql+eKirrL+ Kf+ ++++ ++++f+++h++ +f+lskk Migut.A01003.1.p 24 KFAKVFREEDEIGVLEGLYVYWKCNGV--NHEWKKYHDFIKDDLPHHFSSTQLSEKIRRLRLKFQSNSRN----NNIHFRNAHESLVFDLSKK 110 7999***************999995..589*******************************999....99************* PP DUF573 95 iWgs 98 +W++ Migut.A01003.1.p 111 LWEQ 114 85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	7.5E-19	25	113	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence Send to blast
MIKNNDTQTV SEEEEVHASP SHNKFAKVFR EEDEIGVLEG LYVYWKCNGV NHEWKKYHDF 60 IKDDLPHHFS STQLSEKIRR LRLKFQSNSR NNNIHFRNAH ESLVFDLSKK LWEQEFISTS 120 TNTTPPPPPP SDVGRKICDG DADCDADDGD GDGDGDGDGD GDGEDSMKIA SKKQEFDAAS 180 FPHISALFDR FGFSASKYLT GVNNKKLKKL EKQSRKLIMQ ENQLLLEEML LRKKQCALVV 240 SAFKKCNS*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.A01003.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012841297.1	1e-119	PREDICTED: uncharacterized protein LOC105961610
TrEMBL	A0A022R3F5	0.0	A0A022R3F5_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.A01003.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13664	4	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	6e-10	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Phytozome	Migut.A01003.1.p