PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.A01161.1.p
Common NameLOC105948642, MIMGU_mgv1a013016mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 234aa    MW: 26424.5 Da    PI: 5.0713
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.A01161.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.5e-19113163255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g+++AeIrdp  +g   r++lg+f ta eAa+a+++a+ +++g
  Migut.A01161.1.p 113 HYRGVRRRP-WGKYAAEIRDPARRG--SRVWLGTFETAAEAARAYDRAAFEMRG 163
                       7********.**********95443..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.9E-32112172IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-23113173IPR016177DNA-binding domain
SMARTSM003801.1E-36113177IPR001471AP2/ERF domain
PfamPF008476.1E-14113163IPR001471AP2/ERF domain
PROSITE profilePS5103224.724113171IPR001471AP2/ERF domain
CDDcd000185.34E-29113171No hitNo description
PRINTSPR003676.1E-11114125IPR001471AP2/ERF domain
PRINTSPR003676.1E-11137153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0001944Biological Processvasculature development
GO:0009409Biological Processresponse to cold
GO:0009644Biological Processresponse to high light intensity
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MGNPDELVSA IDRIKMHLLG ELSPRDIGST TTSFFSSGSD YYLSDPGFSV SDYSVDYQQN  60
NPFLPVIDLT TPRSKPSLRI ELPAAVNKFE WIDFQESSQA ANPVVEEEQP QRHYRGVRRR  120
PWGKYAAEIR DPARRGSRVW LGTFETAAEA ARAYDRAAFE MRGSKAILNF PLEIQREECE  180
RRAAAEVGGK RRRDEEEEVA EISRPKMVKC DSEWAPLTPS FWQLSPYGAI LSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-30112178470ATERF1
3gcc_A1e-30112178470ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. {ECO:0000269|PubMed:10715325, ECO:0000269|PubMed:9756931}.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:9756931}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00437DAPTransfer from AT4G17490Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.A01161.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Ethylene induction is completely dependent on a functional ETHYLENE-INSENSITIVE2 (EIN2). Wounding as well as cold stress induction does not require EIN2. Transcripts accumulate strongly in cycloheximide-treated plants, a protein synthesis inhibitor. Seems to not be influenced by jasmonate, Alternaria brassicicola, exogenous abscisic acid (ABA), cold, heat, NaCl or drought stress. {ECO:0000269|PubMed:10715325}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827321.11e-172PREDICTED: ethylene-responsive transcription factor 6-like
SwissprotO803414e-42EF102_ARATH; Ethylene-responsive transcription factor 5
SwissprotQ8VZ913e-42EF103_ARATH; Ethylene-responsive transcription factor 6
TrEMBLA0A022PYF61e-170A0A022PYF6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9632389
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.13e-30ethylene responsive element binding factor 5
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]