PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00065.1.p
Common NameMIMGU_mgv1a026641mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 192aa    MW: 21834.1 Da    PI: 9.8504
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00065.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.62.6e-16127162134
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C+nCg ++  Tpl+R+gp g++tLCnaCGl+++ kg
  Migut.B00065.1.p 127 CTNCGIISndTPLMRKGPTGPRTLCNACGLFWANKG 162
                       *******999**********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5132011.444843IPR010399Tify domain
SMARTSM009793.1E-4843IPR010399Tify domain
PfamPF062008.6E-71241IPR010399Tify domain
PfamPF062035.0E-1464106IPR010402CCT domain
PROSITE profilePS5101712.09464106IPR010402CCT domain
PROSITE profilePS5011410.317121170IPR000679Zinc finger, GATA-type
SMARTSM004011.2E-11121174IPR000679Zinc finger, GATA-type
SuperFamilySSF577162.23E-12123170No hitNo description
Gene3DG3DSA:3.30.50.102.1E-16126168IPR013088Zinc finger, NHR/GATA-type
CDDcd002024.02E-14126170No hitNo description
PfamPF003209.8E-14127162IPR000679Zinc finger, GATA-type
PROSITE patternPS003440127154IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MASDEVPPNV PPHRITLSFH DRVFVFDDVP PQKVQIALLL LGGYELGCDT NGSTSQNKNK  60
CPKREEFINR YRSKKMKRCF EKKIRYNVRQ EVAMRMQRKR GQFAPKKIEE EASMSPNLSD  120
HEDNIACTNC GIISNDTPLM RKGPTGPRTL CNACGLFWAN KGFMRDVSRR FGRNEMLPAY  180
QVAYNGGKTE L*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}.
UniProtTranscriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250|UniProtKB:Q8LAU9}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00065.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA), and drought and salt stresses. Down-regulated by jasmonate and wounding. {ECO:0000269|PubMed:19618278}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011088777.16e-60GATA transcription factor 25-like
SwissprotQ5Z4U53e-46GAT20_ORYSJ; GATA transcription factor 20
SwissprotQ9LRH63e-46GAT25_ARATH; GATA transcription factor 25
TrEMBLA0A022RE151e-139A0A022RE15_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.B00065.1.p1e-142(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1979333
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.21e-48GATA-type zinc finger protein with TIFY domain
Publications ? help Back to Top
  1. Brand LH, et al.
    Screening for protein-DNA interactions by automatable DNA-protein interaction ELISA.
    PLoS ONE, 2013. 8(10): p. e75177
    [PMID:24146751]