PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00196.1.p

Common Name

MIMGU_mgv1a018731mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

SRS

Protein Properties

Length: 125aa MW: 12603.6 Da PI: 4.1512

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00196.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	78.5	1.9e-24	4	55	102	153
DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++P evs +avfrcvrvss+d+ +++aYqt+vsigGhvf GiLydqG+e Migut.B00196.1.p 4 EGDFPGEVSFPAVFRCVRVSSIDNVVDQYAYQTSVSIGGHVFTGILYDQGAE 55 567***********************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05142	6.4E-22	5	55	IPR007818	Protein of unknown function DUF702
TIGRFAMs	TIGR01624	3.1E-25	7	53	IPR006511	Lateral Root Primordium type 1, C-terminal

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence Send to blast
GLEEGDFPGE VSFPAVFRCV RVSSIDNVVD QYAYQTSVSI GGHVFTGILY DQGAEPEGTV 60 NYVTGGSSSS GGGGGGIGLL QQHNFVGGGG GGAAGNTGTT PSSYPTPSPF YAFTSSQFFQ 120 YPKS*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00196.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012836757.1	4e-82	PREDICTED: protein SHI RELATED SEQUENCE 1
TrEMBL	A0A022RBX9	3e-80	A0A022RBX9_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.B00196.1.p	2e-81	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4156	24	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19790.2	2e-21	SHI-related sequence 7

Link Out ? help Back to Top
Phytozome	Migut.B00196.1.p