PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00361.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 199aa MW: 22127.3 Da PI: 8.3278

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00361.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.8	0.0001	8	24	39	55
TCHHHHHHHHHHHHHHH CS HLH 39 sKaeiLekAveYIksLq 55 +K++i+ +Av+YIk+Lq Migut.B00361.1.p 8 DKSTIVDEAVNYIKKLQ 24 7***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	2.2E-5	6	42	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	8.18E-5	7	50	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:3.30.70.260	5.4E-4	123	177	No hit	No description
CDD	cd04873	2.41E-5	124	184	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence Send to blast
NKILLQADKS TIVDEAVNYI KKLQETLEKL QKQKLDKLHN TNNQVITRIN YDPPSLITQQ 60 NFGIHQSREA FLAEMGSTSS TSAVTLASPP INQLFSGPEL SAIFKTWTSA NVVLNVCWKD 120 AHFSVCGSKK PGLFTAICFV MEKHKLDVVS AQVSSDRNRC MYMIHARANG GSDQFQQAFS 180 VEEIYKQAAA EIMLWVNS*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00361.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012836734.1	1e-143	PREDICTED: transcription factor bHLH95-like
TrEMBL	A0A022RBM8	1e-117	A0A022RBM8_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.B00361.1.p	1e-147	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1324	23	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49770.1	6e-17	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.B00361.1.p