PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00770.1.p
Common NameMIMGU_mgv1a019008mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 285aa    MW: 32325.8 Da    PI: 9.7679
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00770.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF421.2e-131152344
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                      i+ +  r++tf kR++g+  K +E  +LCd+ +++ii+++++
  Migut.B00770.1.p 11 INKEKSRNITFKKRKEGLVRKMHEFTTLCDVGACMIIYGPKQ 52
                      777889*********************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004321.3E-11160IPR002100Transcription factor, MADS-box
SuperFamilySSF554559.42E-17180IPR002100Transcription factor, MADS-box
PROSITE profilePS5006616.736151IPR002100Transcription factor, MADS-box
CDDcd002667.24E-18284No hitNo description
PRINTSPR004045.0E-8323IPR002100Transcription factor, MADS-box
PfamPF003191.1E-141152IPR002100Transcription factor, MADS-box
PRINTSPR004045.0E-82338IPR002100Transcription factor, MADS-box
PRINTSPR004045.0E-83859IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MGRAKLNMEL INKEKSRNIT FKKRKEGLVR KMHEFTTLCD VGACMIIYGP KQDKAAAGPA  60
EPEIWPPNPE QVHRIIDIYK SKNKDSGNKN FGLSDFFHDR KRKIDEELEK LRKKNFEAKY  120
PTWPGFLKGM TEAGLREFAA YLGNRAERVK SRIDLLRRSK EGSAGEFRGV DLEWTNHFPI  180
HYPPAVIDYQ NPMRMFLSND NDVHFGGGGT ASTSGNISFK GQIFYESTGP AVGRGLVDTS  240
PRSLGLLYAP PVVPVPPFTV RENHDGGPED IFQYQMNHRV RYFD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00770.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020552001.11e-104agamous-like MADS-box protein AGL14
TrEMBLA0A022QGX20.0A0A022QGX2_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24572253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.15e-20M-type_MADS family protein