PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00796.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ZF-HD
Protein Properties Length: 143aa    MW: 15987.7 Da    PI: 7.2971
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00796.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer70.72.3e-221267357
       ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57
                       v+YkeC++NhAas+ g  +DGCg f + +g++ g+ +a+ Ca CgCHRnFH r  
  Migut.B00796.1.p 12 LVMYKECMHNHAASTRGFLLDGCGLFETPSGTTtGSREAMFCAVCGCHRNFHQRVA 67
                      589***********************88878777******************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257741.0E-101069IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047702.8E-191366IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015662.3E-181565IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152320.1081566IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MANDNAVKVE MLVMYKECMH NHAASTRGFL LDGCGLFETP SGTTTGSREA MFCAVCGCHR  60
NFHQRVAVEI PQHHRSSSIR HHHHQQQPAS HPDQQQQQQQ PASHPDQQQQ PALHPHQPQQ  120
PASHPDQQQQ PALHPHQPQQ PA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00796.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850255.17e-98PREDICTED: sex-determining region Y protein-like
TrEMBLA0A022QAG01e-53A0A022QAG0_ERYGU; Uncharacterized protein
STRINGMigut.B00796.1.p3e-97(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69600.12e-15zinc finger homeodomain 1