PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00798.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

ZF-HD

Protein Properties

Length: 165aa MW: 17847.4 Da PI: 10.7244

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00798.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	65.5	1e-20	12	68	3	58
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 v Yk+C++NhAas+ g +DGCg f + +g++ g+ +a+ Ca CgCHRnFH r + Migut.B00798.1.p 12 LVIYKKCMHNHAASTRGFLLDGCGLFEAPSGTTaGSREAMFCAVCGCHRNFHQRVAA 68 589*********************99999988*****************9865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	4.0E-10	13	65	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	2.2E-18	13	66	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	5.6E-17	15	65	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	19.721	15	66	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence Send to blast
MANDNALKVE MLVIYKKCMH NHAASTRGFL LDGCGLFEAP SGTTAGSREA MFCAVCGCHR 60 NFHQRVAAAA RRQTPAASPA LTTSPATRHV QSRAPHRHAS GTSARQGVPP QHGVRATRAK 120 RITRAQSEMH TNTVTTNDTT EVEILVMYKK CMHKHAASNM LQTL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00798.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012850144.1	5e-61	PREDICTED: zinc-finger homeodomain protein 7-like
TrEMBL	A0A022QGZ2	4e-62	A0A022QGZ2_ERYGU; Uncharacterized protein
STRING	Migut.B00798.1.p	1e-119	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02540.1	1e-14	homeobox protein 21

Link Out ? help Back to Top
Phytozome	Migut.B00798.1.p