PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00799.1.p

Common Name

MIMGU_mgv11b020683mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

ZF-HD

Protein Properties

Length: 84aa MW: 9221.53 Da PI: 7.9319

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00799.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	71.4	1.4e-22	12	68	3	58
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 v+YkeC +NhAas g +DGCg f +g++ g+ +a+ Ca CgCHRnFH r v+ Migut.B00799.1.p 12 LVMYKECIHNHAASNRGFLLDGCGLFEGPSGTTtGSREAMLCAVCGCHRNFHQRVVV 68 589*********************98878777*****************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	4.0E-11	6	76	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	1.9E-19	13	67	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMs	TIGR01566	7.5E-19	15	65	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	20.09	15	66	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 84 aa Download sequence Send to blast
MATDNALKVE MLVMYKECIH NHAASNRGFL LDGCGLFEGP SGTTTGSREA MLCAVCGCHR 60 NFHQRVVVEI PQHHRSSSIR HQQ*

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00799.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012850255.1	1e-51	PREDICTED: sex-determining region Y protein-like
Swissprot	O64722	1e-13	ZHD3_ARATH; Zinc-finger homeodomain protein 3
TrEMBL	A0A022QEZ4	1e-55	A0A022QEZ4_ERYGU; Uncharacterized protein
STRING	Migut.B00799.1.p	2e-56	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02540.1	5e-16	homeobox protein 21

Link Out ? help Back to Top
Phytozome	Migut.B00799.1.p

Publications ? help Back to Top
González-Grandío E, et al. Abscisic acid signaling is controlled by a BRANCHED1/HD-ZIP I cascade in Arabidopsis axillary buds. Proc. Natl. Acad. Sci. U.S.A., 2017. 114(2): p. E245-E254 [PMID:28028241] Li B, et al. Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis. Plant Cell, 2018. 30(1): p. 178-195 [PMID:29317470]