PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00825.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 185aa MW: 21098.2 Da PI: 9.0806

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00825.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.4	1.6e-10	2	52	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 hn+ Er RR ++N ++ Lrel+P + + ++k+ +i+ k+ eYI +L Migut.B00825.1.p 2 EHNAKERIRRMKLNASYLALRELMPRSRRSSKKRWAAPAIVDKVLEYIPEL 52 6***********************64556566************988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.884	1	52	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.6E-7	2	52	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.96E-10	2	67	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	3.8E-9	2	66	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	8.89E-6	3	57	No hit	No description
SMART	SM00353	4.4E-5	4	58	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence Send to blast
MEHNAKERIR RMKLNASYLA LRELMPRSRR SSKKRWAAPA IVDKVLEYIP ELKSEIEALR 60 SKKESANIII SAAKNKNIIP TSKCQLIPAV LLNKINQEEA TVQISIARSE GEEYDQNGYL 120 TSLFTNLLQR LEDEGICVKN ASTLYVYESR LICYNLHIQI NNTTSGADFN IEELNTDKVI 180 SWLR*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00825.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012850147.1	1e-132	PREDICTED: transcription factor bHLH101
TrEMBL	A0A022QJ63	1e-110	A0A022QJ63_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.B00825.1.p	1e-131	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15451	6	7

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	1e-19	bHLH family protein

Link Out ? help Back to Top
Phytozome	Migut.B00825.1.p