PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00897.1.p
Common NameLOC105978123, MIMGU_mgv1a019088mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 250aa    MW: 26657.3 Da    PI: 10.2319
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00897.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.30.001183205123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C+ C+k+F++   L  H r+H
  Migut.B00897.1.p 183 HECERCHKTFTSGQALGGHKRKH 205
                       78*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.69E-6120141No hitNo description
PfamPF139123.2E-6121140IPR007087Zinc finger, C2H2
SuperFamilySSF576674.69E-6178205No hitNo description
PROSITE profilePS501579.993183205IPR007087Zinc finger, C2H2
PfamPF139123.1E-10183207IPR007087Zinc finger, C2H2
PROSITE patternPS000280185205IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MALDRSLNSL KNSRRFDFLD VGSWKKSSRR SKRWCQLKLG VDEILAAQGL VMLSRTGGGS  60
YPSPPAAAAA AKHDGDNPVR PVTTTISAAA SLNYSDFKIS QESVPTTPSP PPAVPKSYRS  120
CVNCGKGFNS YQALGGHKTS CRLKPTIAAA IDRNPYAVIP AVAVISAVAK CNSGMNRSGY  180
NLHECERCHK TFTSGQALGG HKRKHYEGVI GAGSKKSRKT SSNGSAASPK MILDFDLNLP  240
PLPDQDFEF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00897.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858993.10.0PREDICTED: zinc finger protein 1-like
TrEMBLA0A022PV150.0A0A022PV15_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1500529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.24e-15zinc-finger protein 2