PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00898.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 192aa    MW: 20384 Da    PI: 10.077
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00898.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034118140123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C+ C+k+F++   L  H r+H
  Migut.B00898.1.p 118 HECETCHKTFTSGQALGGHKRKH 140
                       78*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576673.58E-66182No hitNo description
PfamPF139127.9E-66281IPR007087Zinc finger, C2H2
SuperFamilySSF576673.58E-6113140No hitNo description
PROSITE profilePS501579.93118140IPR007087Zinc finger, C2H2
PfamPF139127.3E-11118142IPR007087Zinc finger, C2H2
PROSITE patternPS000280120140IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
QQRRHRRTGG GPYPSPPAKP AVPETTIPAA ASLDYSDVKI SQESVPTTPS PPPPVAKSYR  60
SCVDCGKGFN SYQVLGGHKA TCRLKPTTVA AIDRNPYTVI PAVAAKYNSG TNPSGKLHEC  120
ETCHKTFTSG QALGGHKRKH YEGVIGGGSK KSRSTSSNGG AASQKMIRDF DLNLPPPPDQ  180
DHSFRILYIS L*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00898.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858993.14e-84PREDICTED: zinc finger protein 1-like
TrEMBLA0A022PX171e-92A0A022PX17_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1500529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.21e-20zinc-finger protein 2