PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00899.1.p
Common NameMIMGU_mgv1a018962mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 248aa    MW: 26163.8 Da    PI: 10.0102
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00899.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00014180202123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C++C+k+F++   L  H r+H
  Migut.B00899.1.p 180 HECEICHKTFTSGQALGGHKRKH 202
                       78*******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.74E-6176204No hitNo description
PfamPF139124.2E-11180204IPR007087Zinc finger, C2H2
PROSITE profilePS501579.827180202IPR007087Zinc finger, C2H2
PROSITE patternPS000280182202IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MALDRSLNCS AVVGSWKKSS RRSKRWCQLK LGADEILAAQ GLVMLARSGG GPYPSPPAAN  60
HLITGEAKHG GNKPAISAAA SLDFKISQEW VPTTPCPPPA VPKSYRSCAD SGKGFNSYQA  120
LDRNPDAVIP AIPAAAIERN PYAVIPAAAI ERNPYAVIPA VAAASTRCTS GMNRSGNKLH  180
ECEICHKTFT SGQALGGHKR KHYEGVIGAG SKKSRKTSSN GGAATQKMIR DFDLNLPPPP  240
DDQDFKF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00899.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827263.10.0PREDICTED: zinc finger protein 1-like
RefseqXP_012858992.10.0PREDICTED: zinc finger protein 1-like
RefseqXP_012859027.10.0PREDICTED: zinc finger protein 1-like
TrEMBLA0A022PV091e-180A0A022PV09_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1500529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.21e-09zinc-finger protein 2