PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00901.1.p
Common NameLOC105978154, MIMGU_mgv1a019503mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 258aa    MW: 27374 Da    PI: 10.1675
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00901.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034191213123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C+ C k+F++   L  H r+H
  Migut.B00901.1.p 191 HECETCQKTFTSGQALGGHKRMH 213
                       78******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139121.1E-4136151IPR007087Zinc finger, C2H2
SuperFamilySSF576673.55E-6188215No hitNo description
Gene3DG3DSA:3.30.160.602.3E-4189213IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139124.2E-10191215IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.325191213IPR007087Zinc finger, C2H2
PROSITE patternPS000280193213IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MALDRSLNSA PPLKNARHFD FLDLPSSSAV VGSWKKSSRR SKRRWQIKLG EDELSAARLV  60
MLARTGGGPY PSPPAAAAAS PSTEESKHDG DNPVCPVPII SAAASLHVKI SQESVPTTPS  120
PPPAVPKSYR RCADSGKGFN SYQALGGHKA SCCLKPTTAA AIDRNPYAVI PAVATASTRC  180
TSGMNRSGKI HECETCQKTF TSGQALGGHK RMHYEGVIGA RSKKSRKTSS NGGAATQKMI  240
RDFDLNLPPL PDQDFEF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00901.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012859026.10.0PREDICTED: zinc finger protein ZAT6-like
TrEMBLA0A022PYP20.0A0A022PYP2_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1500529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19580.23e-18zinc-finger protein 2