PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00945.1.p

Common Name

MIMGU_mgv1a022917mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

NF-YB

Protein Properties

Length: 139aa MW: 15130.1 Da PI: 4.139

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00945.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	31.5	4.2e-10	23	61	58	96
NF-YB 58 krktingddllwalatlGfedyveplkvylkkyrelege 96 r+ + ++d++ ++a+lGf+dyve lk +l+kyr + e Migut.B00945.1.p 23 MRRRLFTKDVIASMASLGFDDYVELLKFFLNKYRAEDHE 61 58888999**************************87766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47113	1.36E-6	1	66	IPR009072	Histone-fold
Gene3D	G3DSA:1.10.20.10	5.0E-7	24	67	IPR009072	Histone-fold

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence Send to blast
MPMTNIVRIL CRTLPPHAKI SDMRRRLFTK DVIASMASLG FDDYVELLKF FLNKYRAEDH 60 ERSASIGTQQ PPAAPVAPPV PAPPPATLVV MGDGAVIVDD EEEVDPDEYI GFDEVIRMYF 120 LNDYGDGDAE GSPSSGGD*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00945.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012857869.1	5e-39	PREDICTED: nuclear transcription factor Y subunit B-9-like
TrEMBL	A0A022RYL0	2e-95	A0A022RYL0_ERYGU; Uncharacterized protein
STRING	Migut.B00945.1.p	3e-96	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	4e-13	nuclear factor Y, subunit B6

Link Out ? help Back to Top
Phytozome	Migut.B00945.1.p