PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B00988.2.p
Common NameLOC105958213, MIMGU_mgv1a015972mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GATA
Protein Properties Length: 125aa    MW: 13950.1 Da    PI: 10.6905
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B00988.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA611.5e-191750134
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                      Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk++
  Migut.B00988.2.p 17 CSDCKTTKTPLWRSGPSGPKSLCNACGIKHRKRR 50
                      ********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011413.1911147IPR000679Zinc finger, GATA-type
SMARTSM004013.4E-131163IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.81E-131361No hitNo description
Gene3DG3DSA:3.30.50.101.5E-161551IPR013088Zinc finger, NHR/GATA-type
CDDcd002024.71E-151666No hitNo description
PROSITE patternPS0034401742IPR000679Zinc finger, GATA-type
PfamPF003202.6E-171750IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MLQEEGDLSD TTNKKSCSDC KTTKTPLWRS GPSGPKSLCN ACGIKHRKRR PAEGWKNEVK  60
KGKIGKTRKM IKPLGEKVEI ENSEEERSRS MKKKSRRRQS QSQWGEVERA ALLLMALSCG  120
AVFA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B00988.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012837670.11e-83PREDICTED: GATA transcription factor 16-like
TrEMBLA0A022RBZ83e-82A0A022RBZ8_ERYGU; Uncharacterized protein
STRINGMigut.B00988.1.p5e-83(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.19e-15GATA transcription factor 16