PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B00999.1.p

Common Name

MIMGU_mgv1a018411mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

ZF-HD

Protein Properties

Length: 176aa MW: 20360.9 Da PI: 11.45

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B00999.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	50.2	6.2e-16	12	67	3	57
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrev 57 v+YkeC++N A s DGCg f + +g++ + +a+ a CgCHRnFHRr + Migut.B00999.1.p 12 LVMYKECMHNPADSNRDFLHDGCGLFEAPSGTTtRSREAMFRAVCGCHRNFHRRIE 67 589*********************99988886789999***********975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	3.0E-6	10	65	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	4.6E-13	13	66	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	14.942	15	66	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 176 aa Download sequence Send to blast
MATDNSSKVE MLVMYKECMH NPADSNRDFL HDGCGLFEAP SGTTTRSREA MFRAVCGCHR 60 NFHRRIEVEI PPRHRSSRSS SIRHHQQQQQ PSLHPHQPQQ PASHHHHHRG RFAPKQVAAR 120 RQRRALAHHV EGTSAAAQEV PPQHGVRAPC RKRITRAQSE MVRALTERND WKMFRE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B00999.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012837642.1	1e-128	PREDICTED: zinc-finger homeodomain protein 3-like
TrEMBL	A0A022REE9	1e-126	A0A022REE9_ERYGU; Uncharacterized protein (Fragment)
STRING	Migut.B00999.1.p	1e-127	(Erythranthe guttata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69600.1	4e-10	zinc finger homeodomain 1

Link Out ? help Back to Top
Phytozome	Migut.B00999.1.p