PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B01081.1.p

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Trihelix

Protein Properties

Length: 164aa MW: 18958.9 Da PI: 4.7066

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B01081.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.4	1.2e-15	24	66	44	87
trihelix 44 erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 ++s+ Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a Migut.B01081.1.p 24 QKSARCCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFHQLDA 66 7899*********************8.99*********85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	7.7E-10	23	67	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence Send to blast
MHDLLHRTKR QNSTPQCPHL LTHQKSARCC KEKWENINKY FKKVKESNKK RPEDSKTCPY 60 FHQLDAIYRE RGSKSDVVSF PGYGLNPDDN NPMMLPPPIM ARPEQQWPLP PDEQRQPPDQ 120 FQDNESDQDD VDGDEDDEED EAQCFEIVIN KQQSSVTTTN AAD*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that binds specific DNA sequence. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B01081.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975443	1e-34	HG975443.1 Solanum pennellii chromosome ch04, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012853467.1	3e-75	PREDICTED: LOW QUALITY PROTEIN: trihelix transcription factor GT-2-like
Swissprot	Q39117	1e-23	TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBL	A0A022RYW7	6e-94	A0A022RYW7_ERYGU; Uncharacterized protein
STRING	Migut.B01081.1.p	1e-119	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2402	24	59

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	8e-26	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Migut.B01081.1.p