PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.B01615.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 216aa    MW: 24969.7 Da    PI: 9.08
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.B01615.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF41.51.7e-131149341
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41
                      i ++  r++t+ +R+  ++K A+ELSvLC++e+++++  
  Migut.B01615.1.p 11 IPSEKTRKITLRRRLDSLFKRANELSVLCGIEILIVVHN 49
                      678899****************************99865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004322.3E-7160IPR002100Transcription factor, MADS-box
PROSITE profilePS5006613.876147IPR002100Transcription factor, MADS-box
SuperFamilySSF554558.24E-16394IPR002100Transcription factor, MADS-box
PfamPF003194.7E-121151IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MPRKNTKYVQ IPSEKTRKIT LRRRLDSLFK RANELSVLCG IEILIVVHNR NEGHSTLWPT  60
QDKVVDGITK FLNFPERERI KKMVTQEKFL TDKVQDLAGK LLKLQKKNDE TEMGLLMGQL  120
IETGTTHDAL DARRVNGLYR LVEEKLEKLR NRREELYAMR EYNCFGGTVS GVNNNNNNVD  180
LLNETEMEIR ANEVTNSFVE GNRGELLGEV WPMMF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.B01615.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843584.11e-157PREDICTED: agamous-like MADS-box protein AGL80
TrEMBLA0A022QWM11e-119A0A022QWM1_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37820129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G31640.12e-16AGAMOUS-like 92