PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.B01894.1.p

Common Name

MIMGU_mgv1a010232mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 319aa MW: 34904.3 Da PI: 8.2203

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.B01894.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.3	4e-39	46	106	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k++ ++cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknkk s Migut.B01894.1.p 46 KDQVTNCPRCQSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKKPS 106 78999*****************************************************976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	5.0E-26	39	98	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.2E-33	47	104	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.64	50	104	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	52	88	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009639	Biological Process	response to red or far red light
GO:0009845	Biological Process	seed germination
GO:0005634	Cellular Component	nucleus
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence Send to blast
MDSAHHLQWT QEFGVAKSMA EGGGSGACTM ARPPQVVERK LVRPQKDQVT NCPRCQSTNT 60 KFCYYNNYSL TQPRYFCKTC RRYWTEGGTL RNVPVGGGSR KNKKPSSTTS SCNNNSPSSS 120 SMATMPPQLR IPDLNPPSNI SLFSSQNPKI HDHDQGHDLN LGYNQQDYHL HGNNNNNNNI 180 SQFLDFPKID SSSSSSALNF LRSGINNNGV RGFNSFIPMA PGTLEANSLF ASSGFPFQEC 240 KQQSSLAFSN LYGNPNNQDQ TAQENINGSL MFTLGSTTIK QHSSSTSTEA DHDQEKGHDQ 300 INNPNGFWNG MLGGGGSW*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.B01894.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012843875.1	0.0	PREDICTED: dof zinc finger protein DOF2.5 isoform X2
TrEMBL	A0A022R0E0	0.0	A0A022R0E0_ERYGU; Uncharacterized protein
STRING	Migut.B01894.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46590.2	6e-47	Dof family protein

Link Out ? help Back to Top
Phytozome	Migut.B01894.1.p