PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C00090.1.p
Common NameMIMGU_mgv1a022368mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 240aa    MW: 27262.7 Da    PI: 7.7464
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C00090.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.51.6e-1571123155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       ++ +hn+ Er RR++iN+ ++ Lr+llP+ +   +s+Kls  +++ ++v+YI + q
  Migut.C00090.1.p  71 KKLNHNASERDRRKKINNLYSSLRSLLPNeD---QSRKLSIPATVSRVVKYIPEIQ 123
                       6789*************************77...******************8776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.23E-1668144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.72970122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-1271123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.18E-1271127No hitNo description
Gene3DG3DSA:4.10.280.104.0E-1371141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.6E-1176128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MLALSPQFCS VGWLLDESIS HDHQQQNMIN YLSTERQDTS EYSIDLHSPN SSSRTNPKIN  60
DGGGDENKTV KKLNHNASER DRRKKINNLY SSLRSLLPNE DQSRKLSIPA TVSRVVKYIP  120
EIQKEVEKLI HKKEMMTTKM TSSSSSSSSF GLKENQIKQN RSNTNSAVTT TPIGEREIVI  180
QMSTKADYQK RVLLISEAVM SLEEEGFLVT NATSFESFDA RIFYTLHIQV YYIYIINEV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C00090.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012828055.11e-122PREDICTED: transcription factor ORG2-like
TrEMBLA0A022QPF71e-168A0A022QPF7_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.C00090.1.p1e-176(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22262256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.17e-42bHLH family protein