PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C00273.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family bHLH
Protein Properties Length: 98aa    MW: 11206.1 Da    PI: 10.0138
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C00273.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.0003245653554
                      TS-.STCHHHHHHHHHHHHHH CS
               HLH 35 skK.lsKaeiLekAveYIksL 54
                      + K  s a +L+k+++YI+sL
  Migut.C00273.1.p 45 KYKgRSAAKVLQKTCNYIRSL 65
                      556678999**********99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.99E-54784IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.1E-54985IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MTILTEEKRR VLGSGNFVIY RVDQMALESK LTKIEGKGCI RKLYKYKGRS AAKVLQKTCN  60
YIRSLHREVD DLSERLSELL ENTDTTQAAL IRNLLMQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C00273.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1825772e-60AC182577.2 Erythranthe guttata clone MGBa-93F4, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852960.12e-26PREDICTED: transcription factor PRE3
TrEMBLA0A022Q6V65e-25A0A022Q6V6_ERYGU; Uncharacterized protein
STRINGMigut.C00273.1.p2e-64(Erythranthe guttata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.11e-12activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1