PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C01325.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 183aa    MW: 20634.8 Da    PI: 9.8454
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C01325.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF41.91.3e-131153345
                      --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
            SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                      i +++ r  tf kR++g++KK +EL +LC++ev+ ii+  +g+
  Migut.C01325.1.p 11 IADERTRRETFKKRKTGLFKKLNELKTLCNVEVCGIIMNGEGT 53
                      778899999*************************998876665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004321.5E-14160IPR002100Transcription factor, MADS-box
PROSITE profilePS5006616.68152IPR002100Transcription factor, MADS-box
PRINTSPR004041.6E-9323IPR002100Transcription factor, MADS-box
CDDcd002661.77E-20385No hitNo description
SuperFamilySSF554551.57E-20393IPR002100Transcription factor, MADS-box
PfamPF003191.9E-151152IPR002100Transcription factor, MADS-box
PRINTSPR004041.6E-92338IPR002100Transcription factor, MADS-box
PRINTSPR004041.6E-93859IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MVRSKIRYEL IADERTRRET FKKRKTGLFK KLNELKTLCN VEVCGIIMNG EGTQSEVWPS  60
AHEASEVIQK FINLPSSSQT NNMTDQAGFL RQNLSRLSKN LGKETVKVQS LEKELLLVEC  120
LTKGEADVSN SKELHEMLRL LERKIGMIDR RIADLEPSSS NRVVGAKETN IEPQHGKGKQ  180
PL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C01325.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G9H1K66e-97A0A2G9H1K6_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA858166
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.11e-18AGAMOUS-like 80