PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.C01360.1.p
Common NameLOC105974378, MIMGU_mgv1a015981mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 140aa    MW: 15173.9 Da    PI: 9.0836
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.C01360.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.7e-162675255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      +ykG+r++k +g+Wv+eIr+p   g +  r +lg++ t+e Aa a++ a  +l+g
  Migut.C01360.1.p 26 KYKGIRRRK-WGKWVSEIRVP---G-TpERLWLGSYATPEAAAVAHDVAFYCLRG 75
                      8*****998.**********8...3.69************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.8E-92675IPR001471AP2/ERF domain
CDDcd000181.98E-232685No hitNo description
Gene3DG3DSA:3.30.730.102.4E-252685IPR001471AP2/ERF domain
SMARTSM003801.5E-272691IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-172684IPR016177DNA-binding domain
PROSITE profilePS5103221.2982685IPR001471AP2/ERF domain
PRINTSPR003672.6E-82738IPR001471AP2/ERF domain
PRINTSPR003672.6E-84965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MMSSSSDECG NYRNNDEAAA SSSQNKYKGI RRRKWGKWVS EIRVPGTPER LWLGSYATPE  60
AAAVAHDVAF YCLRGNSSPK NLNFPLVLPA GARVGMSPRS VQKAASDAGL AIDARLSDGK  120
SSQRRSGEEY LDISVEDYL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-121994781Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.C01360.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012854922.19e-99PREDICTED: ethylene-responsive transcription factor ERF020
SwissprotO805421e-41ERF19_ARATH; Ethylene-responsive transcription factor ERF019
SwissprotQ9C9I81e-41ERF20_ARATH; Ethylene-responsive transcription factor ERF020
TrEMBLA0A022Q2952e-97A0A022Q295_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA94942028
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.14e-44ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]