PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00183.1.p
Common NameMIMGU_mgv1a000955mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HB-other
Protein Properties Length: 968aa    MW: 107653 Da    PI: 8.4437
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00183.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.52.9e-0560116157
                       TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
          Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                       +r+R  ++++ ++ ++ +F  +   s++e  e++++ g+t++qV+ +F  +R + +k
  Migut.D00183.1.p  60 KRPRDLLNPKAVKYMQFVFSIKDSTSKRETLEISAQFGVTKTQVRDFFTGQRSRVRK 116
                       7999*************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-456111IPR009057Homeodomain-like
PROSITE profilePS500719.7557117IPR001356Homeobox domain
SuperFamilySSF466897.27E-660120IPR009057Homeodomain-like
CDDcd000860.0011460117No hitNo description
SuperFamilySSF476762.43E-6218309IPR017923Transcription factor IIS, N-terminal
Gene3DG3DSA:1.20.930.102.4E-6219307IPR017923Transcription factor IIS, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009911Biological Processpositive regulation of flower development
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 968 aa     Download sequence    Send to blast
MEIVVPTTTS YENLLDAQKD LFQNQIEKLH QIVATQCELT GINPLSQEMA AGALSIKIGK  60
RPRDLLNPKA VKYMQFVFSI KDSTSKRETL EISAQFGVTK TQVRDFFTGQ RSRVRKMVRL  120
SGEKGNKSTA CDAIHDDTTS LSDSNRPPEP VPLYTMAPVP INIEEGPSCS KSDDVLSAMG  180
DPDLHFVNNI LSSMKKEESF SEQVKLLRSI LRMNNPTLIN WFLSEGGLMI LATWLCQAAK  240
EEQTSFLRVI LKVLYYLPMH KALPVHMSAI LQSVNKLRFY RTSDISHRAR TLLSKWSNMF  300
GKNLPLKKSN GLKSASELQD EMLLKQSINE VIGNESWDLK DSSEEAFRLL CDNPDNHGKL  360
DSAQPLKMLT ASGEDSNKRR GVLSSNNRER RKVQLVEHPG QRLAVRSPQV ARSTSATQSR  420
PLSADDIQKS KMRAQFMQSK HGKAITGPDE KLKSESKNTL TSSHASLPPV STPCVQTELE  480
ENRKCDEEVR PESKNTVTSS HASLPSVSTH SVQTELEEKR KHDEAFSEPA KPQEEPPRKK  540
HQRIPIPWRT PPEVKIMESW SVAEGANSKE VEVQKNRIRR EREIFYRSFQ EIPSNPREPW  600
DREMDPDDTL TPEIPIEQLP DVEPSETLSA SANNETLLSA SSENNIHEPD LQLLAELLKN  660
PELVFALTSG GGGNVTSEAT LKLLGIIRKN GVGSLANLVG KADVDEVVVS LPSPTPSTNH  720
VPNGAKQDFS RNPFSRQPAS GIGSTYHATG GALPIRQPQI PAQMVVPPPV ASLQTNTTQL  780
MSEHWQAHTN SQMHHQSIIP PNSFNTQQHL LNANSNRAPP NSYGSSSSHT NWGEPSSGNI  840
KPSPVSILMP PSRSLTPPHH QKPAQMQDPF GANYRYQNNQ SVGNYDAYAG GSVQGGRSSR  900
HAGGPGFESW SPDNSPSRRH EYLPGHYYQD PNVNARAMQQ NMGQPSDYYQ DQRFGGPANR  960
RWPENRR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00183.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833312.10.0PREDICTED: homeobox protein LUMINIDEPENDENS
TrEMBLA0A022S4220.0A0A022S422_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52402123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02560.20.0HB-other family protein