PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00183.2.p
Common NameMIMGU_mgv1a000955mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family HB-other
Protein Properties Length: 923aa    MW: 102892 Da    PI: 9.3979
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00183.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox15.62.8e-051571157
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                      +r+R  ++++ ++ ++ +F  +   s++e  e++++ g+t++qV+ +F  +R + +k
  Migut.D00183.2.p 15 KRPRDLLNPKAVKYMQFVFSIKDSTSKRETLEISAQFGVTKTQVRDFFTGQRSRVRK 71
                      7999*************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.6E-5866IPR009057Homeodomain-like
SuperFamilySSF466893.04E-6975IPR009057Homeodomain-like
PROSITE profilePS5007110.1391272IPR001356Homeobox domain
CDDcd000860.001321572No hitNo description
SuperFamilySSF476762.28E-6173264IPR017923Transcription factor IIS, N-terminal
Gene3DG3DSA:1.20.930.102.2E-6174262IPR017923Transcription factor IIS, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009911Biological Processpositive regulation of flower development
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 923 aa     Download sequence    Send to blast
MRTNRHQSPF PRNGKRPRDL LNPKAVKYMQ FVFSIKDSTS KRETLEISAQ FGVTKTQVRD  60
FFTGQRSRVR KMVRLSGEKG NKSTACDAIH DDTTSLSDSN RPPEPVPLYT MAPVPINIEE  120
GPSCSKSDDV LSAMGDPDLH FVNNILSSMK KEESFSEQVK LLRSILRMNN PTLINWFLSE  180
GGLMILATWL CQAAKEEQTS FLRVILKVLY YLPMHKALPV HMSAILQSVN KLRFYRTSDI  240
SHRARTLLSK WSNMFGKNLP LKKSNGLKSA SELQDEMLLK QSINEVIGNE SWDLKDSSEE  300
AFRLLCDNPD NHGKLDSAQP LKMLTASGED SNKRRGVLSS NNRERRKVQL VEHPGQRLAV  360
RSPQVARSTS ATQSRPLSAD DIQKSKMRAQ FMQSKHGKAI TGPDEKLKSE SKNTLTSSHA  420
SLPPVSTPCV QTELEENRKC DEEVRPESKN TVTSSHASLP SVSTHSVQTE LEEKRKHDEA  480
FSEPAKPQEE PPRKKHQRIP IPWRTPPEVK IMESWSVAEG ANSKEVEVQK NRIRREREIF  540
YRSFQEIPSN PREPWDREMD PDDTLTPEIP IEQLPDVEPS ETLSASANNE TLLSASSENN  600
IHEPDLQLLA ELLKNPELVF ALTSGGGGNV TSEATLKLLG IIRKNGVGSL ANLVGKADVD  660
EVVVSLPSPT PSTNHVPNGA KQDFSRNPFS RQPASGIGST YHATGGALPI RQPQIPAQMV  720
VPPPVASLQT NTTQLMSEHW QAHTNSQMHH QSIIPPNSFN TQQHLLNANS NRAPPNSYGS  780
SSSHTNWGEP SSGNIKPSPV SILMPPSRSL TPPHHQKPAQ MQDPFGANYR YQNNQSVGNY  840
DAYAGGSVQG GRSSRHAGGP GFESWSPDNS PSRRHEYLPG HYYQDPNVNA RAMQQNMGQP  900
SDYYQDQRFG GPANRRWPEN RR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00183.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833312.10.0PREDICTED: homeobox protein LUMINIDEPENDENS
TrEMBLA0A022S4220.0A0A022S422_ERYGU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02560.21e-161HB-other family protein