PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00403.1.p
Common NameMIMGU_mgv1a022330mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 218aa    MW: 24787.8 Da    PI: 9.2075
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00403.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.5e-056082123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      y+C+ C+k F++   L  H+++H
  Migut.D00403.1.p 60 YRCSFCKKEFKSAQALGGHMNVH 82
                      9********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.4E-45785IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576676.78E-75786No hitNo description
PROSITE profilePS5015711.4486087IPR007087Zinc finger, C2H2
PfamPF139122.9E-76083IPR007087Zinc finger, C2H2
SMARTSM003550.00146082IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002806282IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008361Biological Processregulation of cell size
GO:0009755Biological Processhormone-mediated signaling pathway
GO:0010093Biological Processspecification of floral organ identity
GO:0010160Biological Processformation of organ boundary
GO:0042127Biological Processregulation of cell proliferation
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MEKMKWVSGE RPMKDPTTRD GRLRHHQGII TTTTTTNDQN QSCFEKDLMY GGLSWPQRNY  60
RCSFCKKEFK SAQALGGHMN VHRRDRARLR QLSPPLVINP NPSFSHLSSS APPPTPHHQH  120
QHEFLLLPNM PSSSSATNSY YSPYTKSNTV VCRGDHGREN KNKGAAVLEF MNKVEDARVS  180
DNRNDFVRLD LKLGLFDQDN LNHQDLDLDL ELRLGSS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00403.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835943.11e-164PREDICTED: transcriptional regulator SUPERMAN-like
TrEMBLA0A022S5521e-162A0A022S552_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21102453
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42410.11e-20zinc finger protein 11