PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D00641.1.p

Common Name

LOC105957488, MIMGU_mgv1a011969mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

bHLH

Protein Properties

Length: 266aa MW: 29437.9 Da PI: 7.1795

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D00641.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.7	7.5e-07	157	183	4	30
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 4 ahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR +iN+++ L++++P + Migut.D00641.1.p 157 SHSLAERVRRGKINERLRCLQDIVPGC 183 8************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.19E-15	151	219	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.57E-9	151	208	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.7E-14	153	215	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	14.462	153	203	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.5E-6	159	209	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence Send to blast
MADFFLQNFK QSFSLEDFDP GSDFVNQFSG LNHSLIGSFP HDSIFPQLSP GPGNLDNFPG 60 LFIHDDKNVA VTPFTEPVIL NNNHQKNTKR KADDTSTPES SSANSSAYSS PQVSDNGIRK 120 PNCGRRGKKA KGGNEKEDEK PREVIHVRAK RGQATDSHSL AERVRRGKIN ERLRCLQDIV 180 PGCYKTMGMA VMFDEIINYV QSLQNQVEFL SMKLTAASTY FDFNSDTYAM ETMQKANAAI 240 QGLSSGQISP LSLDFGCYNQ LPHTK*

Functional Description ? help Back to Top
Source	Description
UniProt	Positive regulator of brassinosteroid signaling. {ECO:0000269\|PubMed:12454087}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D00641.1.p

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by brassinosteroid, auxin and ethylene, and repressed by abscisic acid. Insensitive to gibberellic acid. {ECO:0000269\|PubMed:12454087}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012836866.1	0.0	PREDICTED: transcription factor BEE 3-like
Swissprot	Q8GWK7	8e-59	BEE3_ARATH; Transcription factor BEE 3
TrEMBL	A0A022S0B6	0.0	A0A022S0B6_ERYGU; Uncharacterized protein
STRING	Migut.D00641.1.p	0.0	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3971	23	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73830.1	1e-57	BR enhanced expression 3

Link Out ? help Back to Top
Phytozome	Migut.D00641.1.p
Entrez Gene	105957488

Publications ? help Back to Top
Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. Differentiation, 2010. 80(1): p. 1-8 [PMID:20219281]