PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00936.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ARR-B
Protein Properties Length: 494aa    MW: 54456.4 Da    PI: 7.0049
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00936.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like70.13.4e-22260308554
           G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                       +Wt+eLH++F++aveqL G+ +  Pk+ilelm+v+gLt+ +v+SHLQk R
  Migut.D00936.1.p 260 EWTQELHAKFMDAVEQL-GEGRCFPKEILELMDVPGLTRMQVASHLQKCR 308
                       7****************.9*****************************98 PP
2Response_reg44.11.1e-15131151104
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vd +   +   +++le  +y +v+ ++ +++a+ +l   +  +D+++  ++ p+++G++ll++ ++ +  lp+++++a++++ +a +al+
  Migut.D00936.1.p  13 VLLVDHDSESLVSTAKLLEICQY-RVTFVELASAAISMLLSGKakFDVVMANVNSPDLHGFKLLQHAATMG--LPVVLMSAEENSLMAMRALE 102
                       899*999999999**********.***************655556*******************9877755..******************** PP

                       TTESEEEESS--H CS
      Response_reg  92 aGakdflsKpfdp 104
                        Ga  ++ Kp   
  Migut.D00936.1.p 103 NGAFLYIKKPATL 115
                       **********754 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.34E-1910138IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.7E-2110147No hitNo description
SMARTSM004487.1E-1311121IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011027.33112126IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.9E-1113116IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.22E-1314126No hitNo description
PROSITE profilePS5129411.189251312IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.3E-21255309IPR009057Homeodomain-like
SuperFamilySSF466891.79E-15255308IPR009057Homeodomain-like
TIGRFAMsTIGR015578.0E-19259309IPR006447Myb domain, plants
PfamPF002494.1E-7260307IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
SSFHPSVVHE IHVLLVDHDS ESLVSTAKLL EICQYRVTFV ELASAAISML LSGKAKFDVV  60
MANVNSPDLH GFKLLQHAAT MGLPVVLMSA EENSLMAMRA LENGAFLYIK KPATLDIMRC  120
LWQHVLREKT RLVREREMLA SVNKNANNAN TIVSTNHGSR GVNHDHQFKE MNNNRGFENP  180
DYYNSSNNNN NMGRVSGHLH HVMMKNNKGK AKKKIRGISR HGLINGLDED ECDSDSFHVM  240
VENSNNNNNS GNVKRKMCTE WTQELHAKFM DAVEQLGEGR CFPKEILELM DVPGLTRMQV  300
ASHLQKCRND NWRSPLERRA NQANHDSSPD ANGAQPKPRR FGSKPQLGRT RSGPAQESHG  360
TRQGSETHSE AETPHSGGGH VTPNNNDNGS PQEQYGSSVV AGPSNIRPGA HSSSNPRQHS  420
TDEFFNFPEM DCLMQNLSSG LPQAPAAVVD NPSPSPGSYH VDPAYNDQNS AGPSAETRSN  480
WSSETSNFES DHS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00936.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835162.10.0PREDICTED: uncharacterized protein DDB_G0292186-like
TrEMBLA0A2Z7CBP51e-129A0A2Z7CBP5_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-25response regulator 2