PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00953.1.p
Common NameLOC105948905, MIMGU_mgv1a012697mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family MYB_related
Protein Properties Length: 244aa    MW: 26599 Da    PI: 5.0928
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00953.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.26.8e-12556147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                      +++WT+eE+e l  +v ++G+g Wk I           +R+  ++k++w+++
  Migut.D00953.1.p  5 KLKWTAEEEETLRAGVGKHGTGKWKNILLDPEfkeklSNRSNVDLKDKWRNL 56
                      689*************************9999999999************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.019161IPR017930Myb domain
SuperFamilySSF466892.15E-15358IPR009057Homeodomain-like
SMARTSM007178.8E-7459IPR001005SANT/Myb domain
PfamPF002491.1E-8556IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.7E-13556IPR009057Homeodomain-like
CDDcd116606.84E-20756No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MGNQKLKWTA EEEETLRAGV GKHGTGKWKN ILLDPEFKEK LSNRSNVDLK DKWRNLSVSG  60
GFGASSVTPR GKATVTNVVT PMTEISPSVF VSKETVNDRL PHSPPNVDNA LTDKMVLEAL  120
SSMKDCDGSD CDAIMGFVEV PKGYKIKEAE RGTKTPTPQQ HDVRSRPLQD STPTIIVDTV  180
EEAAKIAADL IAEAEYKSFL AAEAVKEAEK LSLIADNADV LLRSLKEILD EWDDKGNNKS  240
SKS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D00953.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012827958.11e-178PREDICTED: telomere repeat-binding factor 4-like
TrEMBLA0A022S3K01e-177A0A022S3K0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25042355
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.12e-35MYB_related family protein