PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Migut.D00976.1.p

Common Name

LOC105959817, MIMGU_mgv1a013541mg

Organism

Mimulus guttatus

Taxonomic ID

4155

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe

Family

Dof

Protein Properties

Length: 218aa MW: 22495.4 Da PI: 7.7853

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Migut.D00976.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	113.1	1.3e-35	18	74	3	59
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 ++ kcprCds++tkfCyynny+lsqPry+Ck+C+ryWtkGGalrn+PvGgg ++ Migut.D00976.1.p 18 QEYPKCPRCDSADTKFCYYNNYNLSQPRYLCKSCKRYWTKGGALRNIPVGGGGGGSR 74 56779********************************************98643333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-20	8	66	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	4.3E-31	20	70	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	26.888	21	75	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	23	59	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence Send to blast
MHSSLYYSEQ ANLQFPEQEY PKCPRCDSAD TKFCYYNNYN LSQPRYLCKS CKRYWTKGGA 60 LRNIPVGGGG GGSRKTAAKR TSSSSPASPS AAKRPASAAA AVSASNDTSN SSSSNNGGGG 120 GMGENLIFGG QFGNFMDACG SFKGEFGNLL DGLDDSSLLM SGGDRRRQFG DPGSGRNSDP 180 LNGLESGGDA DGFLNIHGGG GGGWPDLSIH TPGSTSQ*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Migut.D00976.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012839763.1	1e-156	PREDICTED: dof zinc finger protein DOF3.1-like
TrEMBL	A0A022S1T0	1e-155	A0A022S1T0_ERYGU; Uncharacterized protein
STRING	Migut.D00976.1.p	1e-156	(Erythranthe guttata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-28	DOF zinc finger protein 1

Link Out ? help Back to Top
Phytozome	Migut.D00976.1.p
Entrez Gene	105959817