PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01100.1.p
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family C2H2
Protein Properties Length: 210aa    MW: 22656.9 Da    PI: 9.9854
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88.5e-055880123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      ++C++C++ F ++  L  H++ H
  Migut.D01100.1.p 58 FSCNYCNRKFYSSQALGGHQNAH 80
                      89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.29E-75585No hitNo description
Gene3DG3DSA:3.30.160.609.1E-45684IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.7185885IPR007087Zinc finger, C2H2
PROSITE patternPS0002806080IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MESLPPPPPY SGDQTVEQPP KTENSDHNYS KQKVVLNLFD DTNNNKPQNS GSPEQRVFSC  60
NYCNRKFYSS QALGGHQNAH KRERTIAKRG GGAAAAFIHH DAAAGYGRYP VHVSSFNRSL  120
GVQAHSMIHK PSFSAASMSY GHSGWAARKQ VGSSSSGGGA ARFDGGRSFS PAADGVGGFR  180
WDSGSSRLKT SHHYHHQDEL KTLDLSLKL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852669.11e-155PREDICTED: zinc finger protein 3-like
TrEMBLA0A022Q9J61e-118A0A022Q9J6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA58272233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25160.19e-28zinc finger protein 3