PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01185.1.p
Common NameMIMGU_mgv1a024468mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family Trihelix
Protein Properties Length: 299aa    MW: 33758.2 Da    PI: 6.8068
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01185.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix65.89.3e-2122104171
          trihelix   1 rWtkqevlaLiearremeerlrrgk............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                       rWt++e+++Lie+++  eer +r+               +p+W+ vs+++++ g++r+p+qC+++w+nl  ++kkik++e+++
  Migut.D01185.1.p  22 RWTRRETMVLIEGKKIAEERGGRRGrrsgsvngstqvHVEPKWDYVSSHCKRNGVTRGPVQCRKRWSNLVSDFKKIKAWEGNK 104
                       8**************999998875335667778888789*****************************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.4E-1121102No hitNo description
Gene3DG3DSA:1.10.10.601.0E-42192IPR009057Homeodomain-like
PROSITE profilePS500906.472291IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MAPLSNGANG NENGYKTPRH PRWTRRETMV LIEGKKIAEE RGGRRGRRSG SVNGSTQVHV  60
EPKWDYVSSH CKRNGVTRGP VQCRKRWSNL VSDFKKIKAW EGNKVINGDG GEGGGESFWL  120
MRSDLRREIK LPGFFDRDVF DVLDGKAFAT NDGYQLALVT INTDENNGED DDEDFEEENE  180
RSPVSSPVPI SEMKYQPFYQ AESSQENKRQ PGPHFNGGSD FQEGAKRRRQ SSSDSRNSDV  240
EDLLVKALER NTNLLNAHFD EQKLNFQLDR DRQNSQHDSL IAALTKVTDA LEKIANKL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01185.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012852597.11e-176PREDICTED: uncharacterized protein LOC105972206
TrEMBLA0A022QAA31e-167A0A022QAA3_ERYGU; Uncharacterized protein
STRINGMigut.D01185.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17862460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-59Trihelix family protein