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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Migut.D01205.1.p |
| Common Name | LOC105972417, MIMGU_mgv1a010418mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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| Family |
BBR-BPC |
| Protein Properties |
Length: 314aa MW: 33645.7 Da PI: 9.7413 |
| Description |
BBR-BPC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Migut.D01205.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GAGA_bind | 258.7 | 3.4e-79 | 7 | 309 | 5 | 301 |
GAGA_bind 5 gsre.rnkgyye........paaslkenlglqlmssiaerdaki........rernlalsekkaavaerdmaflqrdkalaernkalverdnk 80
g+ + rn+++++ p ++ ++++ l+lm s+ e r+l ++++ + ++++ + + l+ + + +k
Migut.D01205.1.p 7 GNVNsRNWTFHQysrtpyeeP-HHHHNHMPLNLMPSMIETSLSGggggggggGVRELPVTASTNHHHHHHITG-ISGGPLNPLSCWMGPNSSK 97
333359998766667777533.467779999999999876666588999998555554455555555555443.5667777777777778899 PP
GAGA_bind 81 llalllvenslasalpvgvqvlsgtksidslqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkkse 172
+l++ l n + p + q+ +++s s+ q++ p+ + s + + ee++ e + + + +kkr + k++k+kk++
Migut.D01205.1.p 98 YLNNPLSVN---PNRPYYLQSYVDVSSEASSPQITLPKNDTSLMInKVEESCEERDN-SGGGGSG-GGVAVKKRGGGGGGKAPKEKKPRT--- 182
998887544...466777776666666665666555444433333133333333332.3333333.333334455555666666666665... PP
GAGA_bind 173 kskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgaf 265
+k ++++ +r+ka+kk ++v+ng ++D+s++P+P+CsCtG+ +qCY+WG+GGWqSaCCtt +Sv+PLPvstkrrgaRiagrKmS gaf
Migut.D01205.1.p 183 -NKTPRGAPNE-DRAKAPKKMAEVVINGQNMDISKIPIPICSCTGTAHQCYRWGSGGWQSACCTTGLSVHPLPVSTKRRGARIAGRKMSVGAF 273
.2223344443.699****************************************************************************** PP
GAGA_bind 266 kklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
kk+LekL++eGyd+snp+DL+++WAkHGtnkfvtir
Migut.D01205.1.p 274 KKVLEKLSSEGYDFSNPIDLRSYWAKHGTNKFVTIR 309
***********************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MDDNENGNVN SRNWTFHQYS RTPYEEPHHH HNHMPLNLMP SMIETSLSGG GGGGGGGGVR 60
ELPVTASTNH HHHHHITGIS GGPLNPLSCW MGPNSSKYLN NPLSVNPNRP YYLQSYVDVS 120
SEASSPQITL PKNDTSLMIN KVEESCEERD NSGGGGSGGG VAVKKRGGGG GGKAPKEKKP 180
RTNKTPRGAP NEDRAKAPKK MAEVVINGQN MDISKIPIPI CSCTGTAHQC YRWGSGGWQS 240
ACCTTGLSVH PLPVSTKRRG ARIAGRKMSV GAFKKVLEKL SSEGYDFSNP IDLRSYWAKH 300
GTNKFVTIRD GPG*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds to GA-rich elements (GAGA-repeats) present in regulatory sequences of genes involved in developmental processes. Negatively regulates the homeotic gene AGL11/STK, which controls ovule primordium identity, by a cooperative binding to purine-rich elements present in the regulatory sequence leading to DNA conformational changes. {ECO:0000269|PubMed:14731261, ECO:0000269|PubMed:15722463}. |
