PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01296.1.p
Common NameLOC105951641, MIMGU_mgv1a024673mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 225aa    MW: 25687.9 Da    PI: 10.0597
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01296.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1171.9e-36141431127
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk..rknratksgyWkatgkdke 91 
                       lppGfrF+Ptdee+v +yL++k+ +++l+++  i+e++i++++P ++p    ++++e yfFs+++ ++++g+  ++++at +gyWkatg+ k+
  Migut.D01296.1.p  14 LPPGFRFQPTDEEIVFQYLARKTFSHPLPAHILIPEINIFTLNPFEFP---GNSDEERYFFSNKEGNNRKGNtvQSSKATCTGYWKATGSAKR 103
                       79****************************888***************...457899*******999987663367779************** PP

               NAM  92 vlskkgel..vglkktLvfy..kgrapkgektdWvmheyr 127
                       + ++k++   +g++k+Lvfy  k++++++ +t+W+mhey 
  Migut.D01296.1.p 104 INCSKKAMpiIGIRKSLVFYktKKNSNRAFRTNWTMHEYF 143
                       **97555467**********4334556667*********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-409178IPR003441NAC domain
PROSITE profilePS5100542.35414178IPR003441NAC domain
PfamPF023652.9E-2215142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    Send to blast
MDMMKFVGEG GRKLPPGFRF QPTDEEIVFQ YLARKTFSHP LPAHILIPEI NIFTLNPFEF  60
PGNSDEERYF FSNKEGNNRK GNTVQSSKAT CTGYWKATGS AKRINCSKKA MPIIGIRKSL  120
VFYKTKKNSN RAFRTNWTMH EYFIAVSENY SIQHKNNSLQ AGTLARIGNW TLCRIFLKKR  180
RRNSVAASED YDSDYYKHRN IDLNMSDTDS SSASSSSSPH SDDH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-281417915169Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01296.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830545.11e-169PREDICTED: NAC transcription factor 29-like
TrEMBLA0A022RTI21e-168A0A022RTI2_ERYGU; Uncharacterized protein
STRINGMigut.D01296.1.p1e-169(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13872377
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-48NAC domain containing protein 83