PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D01316.1.p
Common NameMIMGU_mgv1a019287mg
Organism
Mimulus guttatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family M-type_MADS
Protein Properties Length: 180aa    MW: 20636.4 Da    PI: 7.4988
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D01316.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF68.75.5e-22957149
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      k+ie ks  qvtfskRr+g++ KA+ELSvLC+ae+a+++ s+ +k+y y
  Migut.D01316.1.p  9 KKIEKKSSLQVTFSKRRTGLFRKASELSVLCGAEIAILVQSPANKIYSY 57
                      68*********************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004321.4E-32160IPR002100Transcription factor, MADS-box
PROSITE profilePS5006626.59161IPR002100Transcription factor, MADS-box
SuperFamilySSF554555.89E-27171IPR002100Transcription factor, MADS-box
PRINTSPR004041.9E-20323IPR002100Transcription factor, MADS-box
PfamPF003192.6E-231057IPR002100Transcription factor, MADS-box
PRINTSPR004041.9E-202338IPR002100Transcription factor, MADS-box
PRINTSPR004041.9E-203859IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MGRRKIEIKK IEKKSSLQVT FSKRRTGLFR KASELSVLCG AEIAILVQSP ANKIYSYGHP  60
SVETLFHRYQ TGGGGGAASS IIPYREDGRS KYDEAVKKLE IVKRSMKQES NSSSNTRFWW  120
DEPMEGMELY ELEEYAEAME ALKDNVLRRV DEMEKQKSIA ASASMWDLDP TFQINYQDFD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1tqe_P7e-15169169Myocyte-specific enhancer factor 2B
1tqe_Q7e-15169169Myocyte-specific enhancer factor 2B
1tqe_R7e-15169169Myocyte-specific enhancer factor 2B
1tqe_S7e-15169169Myocyte-specific enhancer factor 2B
5f28_A6e-15169169MEF2C
5f28_B6e-15169169MEF2C
5f28_C6e-15169169MEF2C
5f28_D6e-15169169MEF2C
6c9l_A7e-15169169Myocyte-specific enhancer factor 2B
6c9l_B7e-15169169Myocyte-specific enhancer factor 2B
6c9l_C7e-15169169Myocyte-specific enhancer factor 2B
6c9l_D7e-15169169Myocyte-specific enhancer factor 2B
6c9l_E7e-15169169Myocyte-specific enhancer factor 2B
6c9l_F7e-15169169Myocyte-specific enhancer factor 2B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.D01316.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012833833.11e-132PREDICTED: agamous-like MADS-box protein AGL61
TrEMBLA0A022RJK61e-131A0A022RJK6_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13821415
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.17e-22AGAMOUS-like 61